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Explainable Artificial Neural Network for Recurrent Venous Thromboembolism Based on Plasma Proteomics.

Misbah Razzaq, rLouisa Goumidi, Maria-Jesus Iglesias, Gaëlle Munsch, Maria Bruzelius, Manal Ibrahim-Kosta, Lynn Butler, Jacob Odeberg, Pierre-Emmanuel Morange, David Alexandre Tregouet

In: Cinquemani E., Paulevé L. (eds) Computational Methods in Systems Biology. CMSB 2021. Lecture Notes in Computer Science, vol 12881. Springer, Cham. https://doi.org/10.1007/978-3-030-85633-5_7

Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation.

Josine L Min, Gibran Hemani, Eilis Hannon, Koen F Dekkers, Juan Castillo-Fernandez, René Luijk, Elena Carnero-Montoro, Daniel J Lawson, Kimberley Burrows, Matthew Suderman, Andrew D Bretherick, Tom G Richardson, Johanna Klughammer, Valentina Iotchkova, Gemma Sharp, Ahmad Al Khleifat, Aleksey Shatunov, Alfredo Iacoangeli, Wendy L McArdle, Karen M Ho, Ashish Kumar, Cilla Söderhäll, Carolina Soriano-Tárraga, Eva Giralt-Steinhauer, Nabila Kazmi, Dan Mason, Allan F McRae, David L Corcoran, Karen Sugden, Silva Kasela, Alexia Cardona, Felix R Day, Giovanni Cugliari, Clara Viberti, Simonetta Guarrera, Michael Lerro, Richa Gupta, Sailalitha Bollepalli, Pooja Mandaviya, Yanni Zeng, Toni-Kim Clarke, Rosie M Walker, Vanessa Schmoll, Darina Czamara, Carlos Ruiz-Arenas, Faisal I Rezwan, Riccardo E Marioni, Tian Lin, Yvonne Awaloff, Marine Germain, Dylan Aïssi, Ramona Zwamborn, Kristel van Eijk, Annelot Dekker, Jenny van Dongen, Jouke-Jan Hottenga, Gonneke Willemsen, Cheng-Jian Xu, Guillermo Barturen, Francesc Català-Moll, Martin Kerick, Carol Wang, Phillip Melton, Hannah R Elliott, Jean Shin, Manon Bernard, Idil Yet, Melissa Smart, Tyler Gorrie-Stone, BIOS Consortium; Chris Shaw, Ammar Al Chalabi, Susan M Ring, Göran Pershagen, Erik Melén, Jordi Jiménez-Conde, Jaume Roquer, Deborah A Lawlor, John Wright, Nicholas G Martin, Grant W Montgomery, Terrie E Moffitt, Richie Poulton, Tõnu Esko, Lili Milani, Andres Metspalu, John R B Perry, Ken K Ong, Nicholas J Wareham, Giuseppe Matullo, Carlotta Sacerdote, Salvatore Panico, Avshalom Caspi, Louise Arseneault, France Gagnon, Miina Ollikainen, Jaakko Kaprio, Janine F Felix, Fernando Rivadeneira, Henning Tiemeier, Marinus H van IJzendoorn, André G Uitterlinden, Vincent W V Jaddoe, Chris Haley, Andrew M McIntosh, Kathryn L Evans, Alison Murray, Katri Räikkönen, Jari Lahti, Ellen A Nohr, Thorkild I A Sørensen, Torben Hansen, Camilla S Morgen, Elisabeth B Binder, Susanne Lucae, Juan Ramon Gonzalez, Mariona Bustamante, Jordi Sunyer, John W Holloway, Wilfried Karmaus, Hongmei Zhang, Ian J Deary, Naomi R Wray, John M Starr, Marian Beekman, Diana van Heemst, P Eline Slagboom, Pierre-Emmanuel Morange, David-Alexandre Trégouët, Jan H Veldink, Gareth E Davies, Eco J C de Geus, Dorret I Boomsma, Judith M Vonk, Bert Brunekreef, Gerard H Koppelman, Marta E Alarcón-Riquelme, Rae-Chi Huang, Craig E Pennell, Joyce van Meurs, M Arfan Ikram, Alun D Hughes, Therese Tillin, Nish Chaturvedi, Zdenka Pausova, Tomas Paus, Timothy D Spector, Meena Kumari, Leonard C Schalkwyk, Peter M Visscher, George Davey Smith, Christoph Bock, Tom R Gaunt, Jordana T Bell, Bastiaan T Heijmans, Jonathan Mill, Caroline L Relton

Nat Genet. 2021 Sep;53(9):1311-1321. doi: 10.1038/s41588-021-00923-x. Epub 2021 Sep 6.

Association of ABO haplotypes with the risk of venous thrombosis: impact on disease risks estimation.

Louisa Goumidi, Florian Thibord, Kerri L. Wiggins, Ruifang Li-Gao, Michael R Brown, Astrid van Hylckama Vlieg, Juan Carlos Souto, Jose Manuel Soria, Manal Ibrahim-Kosta, Noémie Saut, Delphine Daian-Bacq, Robert Olaso, Philippe Amouyel, Stephanie Debette, Anne Boland, Pascal Bailly, Alanna Morrison, Dennis O Mook-Kanamori, Jean-François Deleuze, Andrew D. Johnson, Paul S. de Vries, Maria Sabater-Lleal, Jacques Chiaroni, Nicholas L. Smith, Frits R. Rosendaal, Daniel I. Chasman, David Tregouet, Pierre-Emmanuel Morange

Blood blood.2020008997.  DOI: https://doi.org/10.1182/blood.2020008997
Published: 2020

A Novel Rare c.-39C>T Mutation in the PROS1 5'UTR Causing PS Deficiency by Creating a New Upstream Translation Initiation Codons.

Labrouche-Colomer  S, Soukarieh O,  Proust C, Mouton C, Huguenin Y, Roux M , Besse C, Boland A, Olaso R , Constans J,  Deleuze JF , Morange PE , Jaspard-Vinassa B , Trégouët DA.

Clin Sci (Lond)  2020 May 19;CS20200403. doi: 10.1042/CS20200403. Online ahead of print [PMID: 32426810].

Associations of autozygosity with a broad range of human phenotypes.

Clark et al.

Nat Commun. 2019 Oct 31;10(1):4957. doi: 10.1038/s41467-019-12283-6. PMID: 31673082.

High-dimensional multi-block analysis of factors associated with thrombin generation potential.

Lorenzo, H., Razzaq, M., Odeberg, J., Saracco, J., Tregouet, D.-A., Thiébaut, R. (2019)

IEEE 32nd International Symposium on Computer-Based Medical Systems (CBMS) 2019. DOI: 10.1109/CBMS.2019.00094

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